Publications 2024 (IVI)

Aboah, J., Campbell, Z.A., Dione, M., Kotchofa, P., Guy, I., Wieland, B., Lo, M., and Rich, K.M. (2024) Economic impact of peste des petits ruminants on small ruminant production in Senegal: Gender considerations within a system dynamics modelling approach. Agricultural Systems 217, 103928. (article)

Ardali, R.#, Garcia-Nicolas, O., Ollagnier, C., Sánchez Carvajal, J.M., Levy, M., Yvernault, P., de Aboim Borges Fialho de Brito, F., and Summerfield, A. (2024) Impact of oil-in-water adjuvanted β-glucan on innate immune memory in piglets. Vaccines (Basel) 12:9, 982. (PubMed) (article)

Avanthay, R.#, Garcia-Nicolas, O., Ruggli, N., Grau-Roma, L., Párraga-Ros, E., Summerfield, A., and Zimmer, G. (2024) Evaluation of a novel intramuscular prime/intranasal boost vaccination strategy against influenza in the pig model. PLoS Pathogens 20:8, e1012393. (PubMed) (article)

Bahiru, A., Assefa, A., Alemu Gemeda, B., Desta, H., Tibebu, A., Sahle, A., and Wieland, B. (2024) A retrospective investigation of abortion storm in Abergele goats, Waghimira Zone, Amhara Region, Ethiopia. Scientifica (Cairo) 2024, 5686443. (PubMed) (article)

Biguezoton, A.S., Ilboudo, G.S., Wieland, B., Sawadogo, R.W., Dah, F.F., Sidibe, C.A.K., Zoungrana, A., Okoth, E., and Dione, M. (2024) Molecular epidemiology of peste des petits ruminants virus in West Africa: Is lineage IV replacing lineage II in Burkina Faso? Viruses-Basel 16:244. (PubMed) (article)

Darpel, K.E., Corla, A., Stedman, A., Bellamy, F., Flannery, J., Rajko-Nenow, P., Powers, C., Wilson, S., Charleston, B., Baron, M.D., and Batten, C. (2024) Long-term trial of protection provided by adenovirus-vectored vaccine expressing the PPRV H protein. npj Vaccines 9:1, 98. (PubMed) (article)

Démoulins, T., Techakriengkrai, N., Ebensen, T., Schulze, K., Liniger, M., Gerber, M., Nedumpun, T., McCullough, K.C., Guzmán, C.A., Suradhat, S., and Ruggli, N. (2024) New generation self-replicating RNA vaccines derived from pestivirus genome. Methods in Molecular Biology 2786, 89-133. (PubMed) (article)

Fusaro, A., Zecchin, B., Giussani, E., Palumbo, E., Aguero-Garcia, M., Bachofen, C., et al. (2024) High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe - Why trends of virus evolution are more difficult to predict. Virus Evolution 10:1, veae027. (PubMed) (article)

Graaf-Rau, A., Schmies, K., Breithaupt, A., Ciminski, K., Zimmer, G., Summerfield, A., Sehl-Ewert, J., Lillie-Jaschniski, K., Helmer, C., Bielenberg, W., Grosse Beilage, E., Schwemmle, M., Beer, M., and Harder, T. (2024) Reassortment incompetent live attenuated and replicon influenza vaccines provide improved protection against influenza in piglets. npj Vaccines 9:1, 127. (PubMed) (article)

Guimerà Busquets, M., and Darpel, K.E. (2024) Purification of epizootic hemorrhagic disease virus (and other orbiviruses) particles from infected mammalian or insect cells. Methods in Molecular Biology 2838, 77-89. (PubMed) (article)

Gütlin, Y., Albertos Torres, D., Gensch, A., Schlotterbeck, A.K., Stöger, L., Heller, S., Infanti, L., Barut, G.T., Thiel, V., Leuzinger, K., Hirsch, H.H., Buser, A., and Egli, A. (2024) Anti-SARS-CoV-2 total immunoglobulin and neutralising antibody responses in healthy blood donors throughout the COVID-19 pandemic: a longitudinal observational study. Swiss Medical Weekly 154, 3408. (PubMed) (article)

Hinojosa, Y.#, Liniger, M., García-Nicolás, O., Gerber, M., Rajaratnam, A., Muñoz-González, S., Coronado, L., Frías, M.T., Perera, C.L., Ganges, L., and Ruggli, N. (2024) Evolutionary-related high- and low-virulent classical swine fever virus isolates reveal viral determinants of virulence. Viruses-Basel 16, 147. (PubMed) (article)

Jores, J., Ruggli, N., Scalisi, N., Jang, J., and Torres-Puig, S. (2024) A stress-free and easy-to-use system to expose pigs to aerosols. Vaccine: X 17, 100457. (PubMed) (article)

Kälin, D., Becsek, A., Stürmer, H., Bachofen, C., Siegrist, D., Jonsdottir, H.R., and Schoster, A. (2024) Immune response after vaccination against tick-borne encephalitis virus (TBEV) in horses. Vaccines (Basel) 12, 1074. (article)

Khanal, R., Heinen, N., Bogomolova, A., Meister, T.L., Herrmann, S.T., Westhoven, S., Nocke, M.K., Todt, D., Jockenhövel, F., Klein, I.M., Hartmann, L., Vondran, F.W.R., Steinmann, E., Zimmer, G., Ott, M., Brown, R.J.P., Sharma, A.D., and Pfaender, S. (2024) MicroRNAs modulate SARS-CoV-2 infection of primary human hepatocytes by regulating the entry factors ACE2 and TMPRSS2. Liver International, in press. (PubMed) (article)

Leborgne, N.G.F., Devisme, C., Kozarac, N.#, Berenguer Veiga, I., Ebert, N., Godel, A., Grau-Roma, L., Scherer, M.#, Plattet, P., Thiel, V., Zimmer, G., Taddeo, A., and Benarafa, C.(2024) Neutrophil proteases are protective against SARS-CoV-2 by degrading the spike protein and dampening virus-mediated inflammation. JCI Insight 9:7, e174133. (PubMed) (article)

Licheri, M.#, Licheri, M.F., Mehinagic, K.#, Radulovic, E.#, Ruggli, N., and Dijkman, R. (2024) Multiplex PCR approach for rapid African swine fever virus genotyping. Viruses-Basel 16:9, 1460. (PubMed) (article)

Marti, A.#, Nater, A., Pego Magalhaes, J., Almeida, L., Lewandowska, M.#, Liniger, M., Ruggli, N., Grau-Roma, L., Brito, F., Alnaji, F.G., Vignuzzi, M., García-Nicolás, O., and Summerfield, A. (2024) Fitness adaptations of Japanese encephalitis virus in pigs following vector-free serial passaging. PLoS Pathogens 20:8, e1012059. (PubMed) (article)

Mbatidde, I., Ndoboli, D., Ayebare, D., Muloi, D., Roesel, K., Ochieng, L., Dione, M., Tenhagen, B.A., Biryomumaisho, S., Wampande, E., Wieland, B., Olsen, J.E., and Moodley, A. (2024) Antimicrobial use and antimicrobial resistance in Escherichia coli in semi-intensive and free-range poultry farms in Uganda. One Health 18, 100762. (PubMed) (article)

Mehinagic, K.#, Liniger, M., Samoilenko, M.#, Soltermann, N., Gerber, M., and Ruggli, N. (2024) A sensitive luciferase reporter assay for the detection of infectious African swine fever virus. Journal of Virological Methods 323, 114854. (PubMed) (article)

Newbrook, K., Khan, N., Fisher, A., Chong, K., Gubbins, S., Davies, W.C., Sanders, C., Busquets, M.G., Cooke, L., Corla, A., Ashby, M., Flannery, J., Batten, C., Stokes, J.E., Sanz-Bernardo, B., Carpenter, S., Moffat, K., and Darpel, K.E. (2024) Specific T-cell subsets have a role in anti-viral immunity and pathogenesis but not viral dynamics or onwards vector transmission of an important livestock arbovirus. Frontiers in Immunology 15, 1328820. (PubMed) (article)

Schmied, K., Ehmann, R., Kristen-Burmann, C., Ebert, N., Barut, G.T., Almeida, L., Kelly, J.N., Thomann, L., Stalder, H., Lang, R.#, Tekes, G., and Thiel, V. (2024) An RNA replicon system to investigate promising inhibitors of feline coronavirus. Journal of Virology 98:2, e0121623. (PubMed) (article)

Schön, J., Barut, G.T., Trüeb, B.S., Halwe, N.J., Berenguer Veiga, I., Kratzel, A., Ulrich, L., Kelly, J.N., Brügger, M., Wylezich, C., Taddeo, A., Aguiar Moreira, E., Túrós, D.#, Grau-Roma, L., Ahrens, A.K., Schlottau, K., Britzke, T., Breithaupt, A., Corleis, B., Kochmann, J., Oliveira Esteves, B.I., Almeida, L., Thomann, L., Devisme, C., Stalder, H., Steiner, S., Ochsenbein, S., Schmied, K., Labroussaa, F., Jores, J., V'kovski, P., Cmiljanovic, V., Alves, M.P., Benarafa, C., Ebert, N., Hoffmann, D., Beer, M., and Thiel, V. (2024) A safe, effective and adaptable live-attenuated SARS-CoV-2 vaccine to reduce disease and transmission using one-to-stop genome modifications. Nature Microbiology 9:8, 2099-2112. (PubMed) (article)

Steiner, S., Kratzel, A., Barut, G.T., Lang, R.M.#, Aguiar Moreira, E., Thomann, L., Kelly, J.N., and Thiel, V. (2024) SARS-CoV-2 biology and host interactions. Nature Reviews Microbiology 22, 206-225. (PubMed) (article)

Subissi, L., Otieno, J.R., Worp, N., Attar Cohen, H., Oude Munnink, B.B., Abu-Raddad, L.J., Alm, E., Barakat, A., Barclay, W.S., Bhiman, J.N., Caly, L., Chand, M., Chen, M., Cullinane, A., de Oliveira, T., Drosten, C., Druce, J., Effler, P., El Masry, I., Faye, A., Ghedin, E., Grant, R., Haagmans, B.L., Happi, C., Herring, B.L., Hodcroft, E.B., Ikejezie, J., Katawera, V., Kassamali, Z.A., Leo, Y.S., Leung, G.M., Kondor, R.J., Marklewitz, M., Mendez-Rico, J., Melhem, N.M., Munster, V., Nahapetyan, K., Naindoo, D., Oh, D.Y., Peacock, T.P., Peiris, M., Peng, Z., Poon, L.L.M., Rambaut, A., Saha, S., Shen, Y., Siqueira, M.M., Volz, E., Tessema, S.K., Thiel, V., Triki, H., van der Werf, S., von Eije, K., Cunningham, J., Koopmans, M.P.G., von Gottberg, A., Agrawal, A., and Van Kerkhove, M.D. (2024) An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution. Nature Medicine 30:9, 2400-2403. (PubMed) (article)

Torres-Puig, S., Crespo-Pomar, S., Akarsu, H., Yimthin, T., Cippa, V., Demoulins, T., Posthaus, H., Ruggli, N., Kuhnert, P., Labroussaa, F., and Jores, J. (2024) Functional surface expression of immunoglobulin cleavage systems in a candidate Mycoplasma vaccine chassis. Communications Biology 7:1, 779. (PubMed) (article)

Wang, L., Ganges, L., Dixon, L.K., Bu, Z., Zhao, D., Truong, Q.L., Richt, J.A., Jin, M., Netherton, C.L., Benarafa, C., Summerfield, A., Weng, C., Peng, G., Reis, A.L., Han, J., Penrith, M.-L., Mo, Y., Su, Z., Vu Hoang, D., Pogranichniy, R.M., Balaban-Oglan, D.-A., Li, Y., Wang, K., Cai, X., and Shi, J. (2024) International African Swine Fever Workshop: Critical issues that need to be addressed for ASF control. Viruses-Basel 16:1, 4. (PubMed) (article)

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